Publications

2020

Shaw JB, Liu W, Ev YVVasil, Bracken CC, Malhan N, Guthals A, Beckman JS, Voinov VG, (2020), Direct Determination of Antibody Chain Pairing by Top-down and Middle-down Mass Spectrometry Using Electron Capture Dissociation and Ultraviolet Photodissociation., Anal Chem, 92(1)

Vimer S, Ben-Nissan G, Morgenstern D, Kumar-Deshmukh F, Polkinghorn C, Quintyn RS, Vasil'ev YV, Beckman JS, Elad N, Wysocki VH, Sharon M, (2020), Comparative Structural Analysis of 20S Proteasome Ortholog Protein Complexes by Native Mass Spectrometry., ACS Cent Sci, 6(4)

van Breemen RB, Hathout Y, Fabris D, (2020), Catherine Fenselau: A distinguished career dedicated to biomedical mass spectrometry., J Mass Spectrom, 55(2)

Williams JP, Morrison LJ, Brown JM, Beckman JS, Voinov VG, Lermyte F, (2020), Top-Down Characterization of Denatured Proteins and Native Protein Complexes Using Electron Capture Dissociation Implemented within a Modified Ion Mobility-Mass Spectrometer., Anal Chem,

Matsumoto S, Fang X, Traber MG, Jones KD, Langelier C, Serpa PHayakawa, Calfee CS, Matthay MA, Gotts JE, (2020), Dose-Dependent Pulmonary Toxicity of Aerosolized Vitamin E Acetate., Am J Respir Cell Mol Biol,

Magana AAlcazar, Wright K, Vaswani A, Caruso M, Reed RL, Bailey CF, Nguyen T, Gray NE, Soumyanath A, Quinn J, Stevens JF, Maier CS, (2020), Integration of mass spectral fingerprinting analysis with precursor ion (MS1) quantification for the characterisation of botanical extracts: application to extracts of Centella asiatica (L.) Urban., Phytochem Anal,

Leachman SA, Hornyak TJ, Barsh G, Bastian BC, Brash DE, Cleaver JE, Cooper CD, D'Orazio JA, Fujita M, Holmen SL, Indra AK, Kraemer KH, I Le Poole C, Lo RS, Lund AW, Manga P, Pavan WJ, Setaluri V, Stemwedel CE, Kulesz-Martin MF, (2020), Melanoma to Vitiligo: The Melanocyte in Biology & Medicine-Joint Montagna Symposium on the Biology of Skin/PanAmerican Society for Pigment Cell Research Annual Meeting., J Invest Dermatol, 140(2)

Kulkarni NN, Takahashi T, Sanford JA, Tong Y, Gombart AF, Hinds B, Cheng JY, Gallo RL, (2020), Innate Immune Dysfunction in Rosacea Promotes Photosensitivity and Vascular Adhesion Molecule Expression., J Invest Dermatol, 140(3)

Dong J, Bobe G, Guan Y, Li G, Zuo R, Shu X, Wang Y, Sun X, Chen X, Li X, (2020), Mitochondrial membrane protein mitofusin 2 as a potential therapeutic target for treating free fatty acid-induced hepatic inflammation in dairy cows during early lactation., J Dairy Sci,

Chen L, Choi J, Leonard SW, Banuvar S, Barengolts E, Viana M, Chen S-N, Pauli GF, Bolton JL, van Breemen RB, (2020), No Clinically Relevant Pharmacokinetic Interactions of a Red Clover Dietary Supplement with Cytochrome P450 Enzymes in Women., J Agric Food Chem, 68(47)

Logan IE, Bobe G, Miranda CL, Vasquez-Perez S, Choi J, Lowry MB, Sharpton TJ, Morgun A, Maier CS, Stevens JF, Shulzhenko N, Gombart AF, (2020), Germ-Free Swiss Webster Mice on a High-Fat Diet Develop Obesity, Hyperglycemia, and Dyslipidemia., Microorganisms, 8(4)

Lowry MB, Guo C, Zhang Y, Fantacone ML, Logan IE, Campbell Y, Zhang W, Le M, Indra AK, Ganguli-Indra G, Xie J, Gallo RL, H Koeffler P, Gombart AF, (2020), A mouse model for vitamin D-induced human cathelicidin antimicrobial peptide gene expression., J Steroid Biochem Mol Biol, 198

Calder PC, Carr AC, Gombart AF, Eggersdorfer M, (2020), Optimal Nutritional Status for a Well-Functioning Immune System Is an Important Factor to Protect against Viral Infections., Nutrients, 12(4)

Díaz-Valdivia NI, Díaz J, Contreras P, Campos A, Rojas-Celis V, Burgos-Ravanal RA, Lobos-González L, Torres VA, Perez VI, Frei B, Leyton L, Quest AFG, (2020), The non-receptor tyrosine phosphatase type 14 blocks caveolin-1-enhanced cancer cell metastasis., Oncogene, 39(18)

Bhattacharya N, Indra AK, Ganguli-Indra G, (2020), Healing of Full-Thickness Murine Skin Wounds Containing Nanofibers Using Splints for Efficient Reepithelialization and to Avoid Contracture., Methods Mol Biol, 2155

Feinstein DL, Nosal DG, Ramanathan S, Zhou J, Chen L, Hershow RC, van Breemen RB, Wright E, Hafner JW, Rubinstein I, (2020), Effects of vitamin K1 treatment on plasma concentrations of long-acting anticoagulant rodenticide enantiomers following inhalation of contaminated synthetic cannabinoids., Clin Toxicol (Phila), 58(7)

Rodríguez E, Hakkou M, Hagen TM, Lemieux H, Blier PU, (2020), Divergences in the control of mitochondrial respiration are associated with lifespan variation in marine bivalves., J Gerontol A Biol Sci Med Sci,

Perera T, Russo C, Takata Y, Bobe G, (2020), Legume Consumption Patterns in US Adults: National Health and Nutrition Examination Survey (NHANES) 2011-2014 and Beans, Lentils, Peas (BLP) 2017 Survey., Nutrients, 12(5)

2019

Torres ERuth S, Hall R, Bobe G, Choi J, Impey S, Pelz C, Lindner JR, Stevens JF, Raber J, (2019), Integrated Metabolomics-DNA Methylation Analysis Reveals Significant Long-Term Tissue-Dependent Directional Alterations in Aminoacyl-tRNA Biosynthesis in the Left Ventricle of the Heart and Hippocampus Following Proton Irradiation., Front Mol Biosci, 6

Bhattacharya N, Sato WJ, Kelly A, Ganguli-Indra G, Indra AK, (2019), Epidermal Lipids: Key Mediators of Atopic Dermatitis Pathogenesis., Trends Mol Med, 25(6)

Preble I, Zhang Z, Kopp R, Garzotto M, Bobe G, Shannon J, Takata Y, (2019), Dairy Product Consumption and Prostate Cancer Risk in the United States., Nutrients, 11(7)

Sheng Z-G, Shen C, Fan R-M, Chao X-J, Liu Y-X, Zhu B-Z, (2019), The Critical Role of X Chromosome-Linked Inhibitor of Apoptosis (XIAP) in Differential Synergism Induced by Pentachlorophenol and Copper-1,10-Phenanthroline Complex in Normal and Cancer Liver Cells., Toxicol Sci, 168(2)

Pearce MC, Satterthwait AC, Zhang X-K, Kolluri SKumar, (2019), Cancer therapeutics based on BCL-2 functional conversion., Apoptosis, 24(1-2)

Chen S, Ge L, Wang H, Cheng Y, Gorantla S, Poluektova LY, Gombart AF, Xie J, (2019), Eluted 25-hydroxyvitamin D from radially aligned nanofiber scaffolds enhances cathelicidin production while reducing inflammatory response in human immune system-engrafted mice., Acta Biomater, 97

Thomas NO, Shay KP, Hagen TM, (2019), Age-related loss of mitochondrial glutathione exacerbates menadione-induced inhibition of Complex I., Redox Biol, 22

Feinstein DL, Nosal DG, Ramanathan S, Zhou J, Chen L, Hershow RC, van Breemen RB, Wright E, Hafner JW, Rubinstein I, (2019), Effects of vitamin K1 treatment on plasma concentrations of long-acting anticoagulant rodenticide enantiomers following inhalation of contaminated synthetic cannabinoids., Clin Toxicol (Phila),

Köhler S, Carmody L, Vasilevsky N, Jacobsen JOB, Danis D, Gourdine J-P, Gargano M, Harris NL, Matentzoglu N, McMurry JA, Osumi-Sutherland D, Cipriani V, Balhoff JP, Conlin T, Blau H, Baynam G, Palmer R, Gratian D, Dawkins H, Segal M, Jansen AC, Muaz A, Ch, (2019), Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources., Nucleic Acids Res, 47(D1)

Rasin A, Devgun JM, Nosal DG, Meehan TJ, van Breemen RB, Thompson TM, (2019), Coagulopathy After Synthetic Cannabinoid Use: A Case Report., Ann Intern Med,

Logan IE, Miranda CL, Lowry MB, Maier CS, Stevens JF, Gombart AF, (2019), Antiproliferative and Cytotoxic Activity of Xanthohumol and Its Non-Estrogenic Derivatives in Colon and Hepatocellular Carcinoma Cell Lines., Int J Mol Sci, 20(5)

Reynolds NC, Zhong JY, Clendinen CA, Moffat SD, Magnusson KR, (2019), Age-related differences in brain activations during spatial memory formation in a well-learned virtual Morris water maze (vMWM) task., Neuroimage, 202

Trias E, Beilby PR, Kovacs M, Ibarburu S, Varela V, Barreto-Núñez R, Bradford SC, Beckman JS, Barbeito L, (2019), Emergence of Microglia Bearing Senescence Markers During Paralysis Progression in a Rat Model of Inherited ALS., Front Aging Neurosci, 11

Mendez R, Miranda C, Armour C, Sharpton T, Stevens JFrederik, Kwon J, (2019), Antiobesogenic Potential of Seaweed Dulse (Palmaria palmata) in High-fat Fed C57BL/6 J Mice (P21-014-19)., Curr Dev Nutr, 3(Suppl 1)

Taylor DM, Aronow BJ, Tan K, Bernt K, Salomonis N, Greene CS, Frolova A, Henrickson SE, Wells A, Pei L, Jaiswal JK, Whitsett J, Hamilton KE, MacParland SA, Kelsen J, Heuckeroth RO, S Potter S, Vella LA, Terry NA, Ghanem LR, Kennedy BC, Helbig I, Sullivan , (2019), The Pediatric Cell Atlas: Defining the Growth Phase of Human Development at Single-Cell Resolution., Dev Cell, 49(1)

Rodríguez E, Dégletagne C, Hagen TM, Abele D, Blier PU, (2019), Mitochondrial Traits Previously Associated With Species Maximum Lifespan Do Not Correlate With Longevity Across Populations of the Bivalve ., Front Physiol, 10

Spooner MH, Jump DB, (2019), Omega-3 fatty acids and nonalcoholic fatty liver disease in adults and children: where do we stand?, Curr Opin Clin Nutr Metab Care, 22(2)

Carpenter EL, Chagani S, Nelson D, Cassidy PB, Laws M, Ganguli-Indra G, Indra AK, (2019), Mitochondrial complex I inhibitor deguelin induces metabolic reprogramming and sensitizes vemurafenib-resistant BRAF mutation bearing metastatic melanoma cells., Mol Carcinog,

Paraiso IL, Plagmann LS, Yang L, Zielke R, Gombart AF, Maier CS, Sikora AE, Blakemore PR, Stevens JF, (2019), Reductive Metabolism of Xanthohumol and 8-Prenylnaringenin by the Intestinal Bacterium Eubacterium ramulus., Mol Nutr Food Res, 63(2)

Head B, Bionaz M, Cherian G, (2019), Flaxseed and Carbohydrase Enzyme Supplementation Alters Hepatic n-3 Polyunsaturated Fatty Acid Molecular Species and Expression of Genes Associated with Lipid Metabolism in Broiler Chickens., Vet Sci, 6(1)

Traber MG, Buettner GR, Bruno RS, (2019), The relationship between vitamin C status, the gut-liver axis, and metabolic syndrome., Redox Biol, 21

Cortés I, Warnock JJ, Ranganathan B, Bobe G, (2019), Iatrogenic cartilage injury associated with the use of stainless-steel cannulas and silicone-guarded cannulas for canine stifle arthroscopy., Vet Surg, 48(8)

Morgan E, Gamble JT, Pearce MC, Elson DJ, Tanguay RL, Kolluri SKumar, Reich NO, (2019), Improved in vivo targeting of BCL-2 phenotypic conversion through hollow gold nanoshell delivery., Apoptosis,

Lande C, Rao S, Morré JT, Galindo G, Kirby J, Reardon PN, Bobe G, Stevens JFrederik, (2019), Linden (Tilia cordata) associated bumble bee mortality: Metabolomic analysis of nectar and bee muscle., PLoS One, 14(7)

Gourdine J-PF, Brush MH, Vasilevsky NA, Shefchek K, Köhler S, Matentzoglu N, Munoz-Torres MC, McMurry JA, Zhang XAaron, Robinson PN, Haendel MA, (2019), Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery., Database (Oxford), 2019

Wallace TC, Frankenfeld CL, Frei B, Shah AV, Yu C-R, B van Klinken J-W, Adeleke M, (2019), Multivitamin/Multimineral Supplement Use is Associated with Increased Micronutrient Intakes and Biomarkers and Decreased Prevalence of Inadequacies and Deficiencies in Middle-Aged and Older Adults in the United States., J Nutr Gerontol Geriatr, 38(4)

Garcia-Jaramillo M, Lytle KA, Spooner MH, Jump DB, (2019), A Lipidomic Analysis of Docosahexaenoic Acid (22:6, ω3) Mediated Attenuation of Western Diet Induced Nonalcoholic Steatohepatitis in Male Mice., Metabolites, 9(11)

Zamzow DR, Elias V, Acosta VA, Escobedo E, Magnusson KR, (2019), Higher Levels of Protein Palmitoylation in the Frontal Cortex across Aging Were Associated with Reference Memory and Executive Function Declines., eNeuro, 6(1)